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Hello,
I've run Centrifuge on my data, and it generated two output files: classification.txt and report.tsv. I then created a kreport.tsv file from the classification.txt file. However, I've notice…
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Hi colleagues,
I am using the btp-operator in a setup where it (among other microservices) is deployed via ArgoCD.
The parameters I use in the secret are imported from Hashicorp Vault via the Arg…
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Hello,
when exporting data from the web app, the headers for the functional annotation do not match the columns.
![unipept_issue](https://github.com/user-attachments/assets/329b2410-1aec-4937-81df…
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A user came across this issue when trying to programatically create TagAnnotations linked under a parent TagSet.
Currently the [linkAnnotation](https://github.com/ome/omero-py/blob/master/src/omero…
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2 Parts
1) Integration with DAVID and other functional annotation tools
2) A purpose of my tool can be to determine if the input gene interacts with other genes with unknown interaction
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### Expected Behavior
We have some Domains in the src/main/groovy directory, in order to bundle Module code together in a prettier way. For this, we use the annotations `@Entity` and `@Artefact("do…
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Funannotate version
Funannotate galaxy australia V 1.8.15 galaxy4
**Describe the bug**
I'm promoting a functional reannotation using public gff files from NCBI. For this process I've conducted a …
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### Search before asking
- [X] I have searched the Ultralytics [issues](https://github.com/ultralytics/ultralytics/issues) and found no similar feature requests.
### Description
Undoubtedly YOLO i…
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first thoughts on how to do updates:
-re-run functional annotation pipeline
-copy new functional annotation directory to analysis folder (preferrably on apollo-stage, otherwise CERES)
-re-run final…
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This template essentially reuses 90% of Glycan template:
* Species
* Strain
* Tissue
* Cell line
* Disease
* Functional annotation/Keyword
* Experimental technique
* Contributor
* Paper…