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https://github.com/RoyZhengGao/edge2vec/blob/e6637e638919b364ac081826c68879daf182ae73/transition.py#L108
Hi Zheng Gao:
I applied edge2vec to @dhimmel hetionet, it has more than 2 million edges. …
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Hello Sergio and Daniel,
My students and I came across your drug repurposing paper as we were putting a manuscript on a similar topic as a part of the [NIH NCATS Translator project](https://ncats.n…
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Hi Daneil,
For Hetionet, I have two brief questions and would like to hear about your insights:
1. on metabolomics side, why didn't you use the [HMDB database](http://www.hmdb.ca/) for linkin…
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Hi, thank for sharing this great task. But I want to ask how can I use entity2src to get the corresponding concepts. For example : Gene::100129669 [Hetionet] Biomedical knowledge graph https://het.io/…
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# How Project Rephetio used Neo4j to predict drug repurposing
**Thursday, November 30, 2017 on [YouTube](https://youtu.be/sNqp0IZQkB0)**. Below is the event description from [Meetup](https://www.me…
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Before this data set goes in hetionet, do the UMLS terms get mapped to either MeSH or DOID?
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I am currently in the process of writing auto-update scripts for hetionet (now known as SPOKE), and I was curious whether you are planning to come out with updates to PharmacotherapyDB in the future.
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AEOLUS provides a curated and standardized version of FAERS. It
- removed duplicate case records
- applied standardized vocabularies with drug names mapped to RxNorm concepts and outcomes mapped…
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In Palo Alto.
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https://github.com/RoyZhengGao/edge2vec/blob/e6637e638919b364ac081826c68879daf182ae73/edge2vec.py#L146-173
Hi Zheng Gao:
In your code, if the 'threshold' of a neighbour was bigger than 'rand' th…