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### This issue is a placeholder for a discussion related to the bio.tools COVID-19 related tools list.
https://covid-19.bio.tools
**What are the tools relevant to COVID-19?**
How can we best ke…
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Firstly, thank you for the development of the SNAF software!
I am encountering a memory overflow issue when running SNAF with 150bp paired-end FASTQ files.
## Environment:
OS: Ubuntu 20.04…
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貼吧活動：(請查閱 [SARS-CoV-2 Timeline by 2020.02.21](https://github.com/agorahub/_meta/blob/agoran/theagora/sari/Memorandum_2020-02-21_SARS-CoV-2-Timeline_Nathan.pdf?raw=true), by Nathan :cloud: )
- Colla…
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Hi,
i'm encountering a chmod issue with pVACSeq:
```
executor > local (3)
[- ] process > merge_fastq -
[a4/caf946] process > RegionsBedToIntervalList (R... [100%] 1…
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Hi there,
Firstly, I ran `GenerateScores.py` with below commands:
```
python ../src/GenerateScores.py ../examples/nmer_test_input.xlsx HLA-A02:01 HLA-A03:01 HLA-B13:02 HLA-B15:01 HLA-C05:01 HLA-C…
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Please note that this is a question about the reproducibility of a research, so this is neither a bug report nor a feature request.
It looks like this package is able to compute all the four key s…
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### Week 1 - Get to know the community
- [X] Join the communication channels
- [X] Open a GitHub issue (this one!)
- [x] Install the Ersilia Model Hub and test the simplest model
- [x] Write a motiva…
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Hi,
I met a problem that there is no output results for some of my samples. The error message shows:
```
Making Immunogenicity prediction
(None, 256)
Making Neoantigen Filtering
usage: seq2neo…
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can I select the neoantigen by the order of pvacseq output.
for example ,
Median MT Score； Median WT Score ；Median Fold Change
should I select by the Median Fold Change?
and the percentile rank i…
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Hi,
There are several saved model checkpoints under model/ directory. Are these models trained on training data only (el_train.csv), or trained on both training and test data (el_train.csv and el.c…