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when trying to run the [easi-fish tutorial](url), I ran into a runtime error in `easifish_registration_pipeline` ([application_pipelines.py:230](https://github.com/GFleishman/bigstream/blob/master/big…
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Hi,
The BioImage.IO team will meet every Wednesday 4PM CET, [check the next meeting in your time zone](https://arewemeetingyet.com/Stockholm/2022-07-13/16:00/w/BioImage.IO%20Weekly%20Meeting#eyJ1c…
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Using the "Load Linux SWC Folder into New Workspace on Sample" option, loading 2,354 SWC files from an S3 bucket takes ~2m. Assuming linear scaling, loading 2 million SWCs would take ~33hr . Clearly, …
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I am running into some problems with the workstation that don't let me correctly use the Horta 3D viewer. The problem is that I always end up with a black screen and not being able to see the brain.…
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Occasionally, when first loading a workspace, I get this error when right-clicking in the 3D viewer to bring up the rendering options (not on a neuron)
```
java.lang.NullPointerException
at org.j…
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Tools > Options > Keymap
Set the hotkey for the "Add/Edit Note" action to "N".
Press "Apply" and "OK".
Select a point in Horta 3D and press "N" - nothing happens. The expected behavior would b…
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### Description of the bug
I hit this error after installing the latest version of nextflow and running the `test_lfq,docker` profile: `Standard error: Process '/usr/local/bin/comet.exe' crashed ha…
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Sockets things cause the gui to hang, removal of wxSOCKET_BLOCK appears to fix this (at least on small scale). Then there are lots of issues with panels not getting events until you change to another…
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## New feature
Upgrade JHDF5 to version 19.04
## Proposal
A new version of JHDF5 is available at version 19.04.
The scijava-pom has integrated this version pending imminent release after t…
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Hi, @Stannislav noticed that during sanitize of a neuron, if a section has zero length subsequent sections are deleted as well. This is probably coming from here:
https://github.com/BlueBrain/Neur…