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Neither of the provided builds work on linux, both work on osx.
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Hi
Can I apply TElocal to single end sequencing?
Thanks
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#20
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### Contact Details [Optional]
_No response_
### System Information
ZENML_LOCAL_VERSION: 0.61.0
ZENML_SERVER_VERSION: 0.61.0
ZENML_SERVER_DATABASE: sqlite
ZENML_SERVER_DEPLOYMENT_TYPE: other
ZE…
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The error I got:
```
/var/spool/slurmd/job10576850/slurm_script: line 34: 22333 Segmentation fault python UNCALLED/scripts/uncalled sim $bwa_prefix $path_ctl_fast5s --ctl-seqsum $path_ctl_seqs…
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Hi,
I am trying to get STAR to work for finding fusion transcripts in PacBio (Iso-Seq) data. Previously I have been using GMAP coupled with a [downstream python script](https://github.com/PacificBios…
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Hi
Thank you for developing the software.I built the TEgtf of Capra hircus using the file of makeTEgtf.pl.How can I upload the TEgtf of Capra hircus to the GTF you build (https://labshare.cshl.ed…
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Hello,
thanks for develop these tools.
I just have 1 questions:
how to extract full-length L1 from the GTF you build (https://labshare.cshl.edu/shares/mhammelllab/www-data/TEtranscripts/TE_G…
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**Description**
As developers we need to investigate how to use the enterprise message queue to support volume tracking:
- is it better to use the message queue currently in traction or would it mak…
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I am using STAR version 2.7.10b. My system has 30GB of RAM
This is my command :
../STAR-2.7.10b/source/STAR --runThreadN 4 --runMode genomeGenerate --genomeDir ./newindex/ --genomeFastaFiles ./GRCm3…