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I am having a problem, where I can't reproduce the results of a single factor analysis, due to different results obtained by the [DeseqStats](https://pydeseq2.readthedocs.io/en/latest/api/docstrings/p…
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Related:
===
https://github.com/zoogie/seedminer/issues/16
https://gbatemp.net/posts/7851408/
https://gbatemp.net/posts/7879961/
https://gbatemp.net/posts/7826386/
https://gbatemp.net/posts/7851…
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GanttStart: 2022-03-29
### Background
Transformed at high efficiency using Bloom lab's liquid recovery protocol: https://github.com/rasilab/rqc_aggregation_aging/issues/98
Library prepped: https://g…
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**To Reproduce**
```
dds = DeseqDataSet(
counts=counts_df,
metadata=metadata,
design_factors=['condition', "RNA_Qubit_actual", 'treatment'],
continuous_factors=["RNA_Qubit_actu…
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For gene ranking (for GSEA, for example) and visualizations (on volcano plots, for example), DESeq author Michael Love suggests shrinking of the effect sizes (log-fold changes) with the `lfcShrink` fu…
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**# When I run T-DESEQ2 in bulk RNA sequencing analysis.**
treatment_groups=['4-3','4-4']
control_groups=['1--1','1--2']
result=dds.deg_analysis(treatment_groups,control_groups,method='DEseq2')
…
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Reply to: Dermot Cochran
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Begin forwarded message:
> From: Joseph Kiniry kiniry@acm.org
> Date: February 5, 2008 9:24:26 AM GMT+00:00
> To: Ian.Stark@ed.ac.uk
> Cc: Dermot Cochra…
atiti updated
11 years ago
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Hello,
I get an error when using plot_ma() with a wald-test object.
The error message is (I've translated it from german if it is not completely correct):
`Error in FUN(X[[i]], ...) : Object 'mea…
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Small value htlcs timing out causing a FC that cost orders of magnitude more than the expired htlc is absurd. It would be nice to have an configuration setting to allow htlcs to expire without trigger…
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download] /content/drive/MyDrive/KodeKloud/Linux Foundation Certified System Administrator LFCS/4 - User and Group Management 14 Topics/10 - Manage access to the root account 0252.mkv has already been…