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Simulated Solute Tempering, 2009
Robert Denschlag, Martin Lingenheil, Paul Tavan, and Gerald Mathias*
https://pubs.acs.org/doi/10.1021/ct900274n
Molecular Simulations of Mixed Lipid Bilayers with…
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Evidently `biolink:BiologicalEntity` has been turned into an abstract class. We need to verify this, and if so, make the necessary changes to `curies-to-categories.yaml`. Slated to be addressed in the…
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I am trying to run CPU simulations (due to extremely long queue times on our GPU cluster) and the performance is killed dramatically -- much more than I would have anticipated. The current CPU run wit…
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**Update:6/19**: So, looking over the Cell Ontology, we could just go through the terms that it imports from GO, including GO:_immune system process_ and the many subclasses descending from this term,…
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Andy Crouse reported an issue where very un-pathway-like things are being returned when querying for `biolink:Pathway`s associated with a disease. See this query: https://arax.ncats.io/?r=41416
It …
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Beginning with sequence-based searches of the literature via PaperBLAST and using the sequences acquired from PomBase, UniProtKB
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During my testing of the beta quick search for G17689DH, I filtered the search by "Disease" on the sidebar and noticed "N-Glycosylation predicted" and "O-Glycosylation predicted" popped up in the "By …
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Hi, thanks for the great project. I'm attempting to load the latest Unimod XML file into Postgres using pyteomics and have encountered a few errors that I've attempted to solve along the way. I've doc…
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## Overview
Although Series 4 is the current _de facto_ series of interest, there seem to be some open questions regarding series 3 (S3). For example, it is still unknown which target is hit by se…
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Hi MyOS community - my name is Matthew and I am a current honours student in Mat’s group. Over the next few months I will be working alongside the community to contribute compounds to the library. (ed…