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```
/users/sli59/anaconda3/envs/torch_lester/lib/python3.7/site-packages/staintools/stain_normalizer.py:41: RuntimeWarning: divide by zero encountered in true_divide
source_concentrations *= (self…
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Hi there
I'm running into an issue when normalising 2 of my images when running normalizers.MacenkoNormalizer(backend='torch')
I am running the following code:
```
target_array = np.load(f"{in…
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Usng the PanNuke dataset with -augmentation_type heavy/brightfield_only
python train.py -data segmentation_dataset.pth --num_epochs 250 --experiment_str my_first_instanseg --requested_pixel_size 0…
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Hi,
Could you please share an ExperimentFile using MIL/CLAM pipeline?
Thanks
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Excellent tool. We are likely to cite you in the future.
Would you consider building out a Jax backend?
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Hi
I was trying faststain on some tif images and ran into this error
```
Traceback (most recent call last):
File "C:\ProgramData\Miniconda3\envs\faststain\lib\runpy.py", line 194, in _ru…
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这是我的配置文件：
# dataset paths
wsi_paths: /data2/longdan/datasets/naomo/kfb12023-11-21_07_00_45.svs
output_path: ./example/output/preprocessing
# basic setups
patch_size: 1024
patch_overlap: 6.25
…
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Hello,
I want to use multiple CPUs to accelerate the function.
When I use your class in multiprocessing, the kernel just freezes, and it does not do anything.
Can you help on this?
Thanks,
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Hi,
Congrats on your accepted work! I'd have some questions to understand the model architecture and performance better.
- What patch encoder did you use in the CLAM baseline? Is it based on Re…
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Hi,
I'm running ```stamp preprocess``` and I'm using .svs files downloaded from TCGA as input. However, I keep on getting the error
```JPEG compression support is not configured.
Failed loading …