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currently I can't add mini models, could I add it please? @alexryd
this is me editing from [sw-koenig]
https://github.com/alexryd/node-shellies-ng/pull/7
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Dear fmriprep experts, we recently encountered an issue with our T1 skull stripping using fMRIprep. Part of dura mater was included in the brain mask leading to very poor EPI-T1 registration.
The com…
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@SachinPawaskarUNO Here are the lists for MNI; one of bones to exclude (including the additional we discussed on the phone - hair, tissue, etc.), the other of bones to include.
[Bone list for MNI.xls…
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Hi,
I use fMRIprep which is working well with most of my MRI data. But I have an issue with a few patients when using fMRIprep. Coregistration is ok and no issue reported when looking at the html …
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I "published" an improved MNI-space registration based on Chris' original work:
https://github.com/gdevenyi/AllenHumanGeneMNI
Mostly the registrations tried harder, and I managed to fix the subjec…
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Dear @cwmok
I sincerely appreciate your excellent work, but I have encountered several issues while reproducing this paper.
Firstly, regarding the number of iterations, I found that the iteration n…
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Hi everyone~
I want to ouline the AAL atlas as suggested in #170,
but when I tried vol = cortex.Volume('aal116MNI.nii.gz', subject='MNI', xfmname='identity')
I got the MNI key error.
I check the…
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About half the subjects had similar errors:
> data/freesurfer/sub-MP02312/mri/orig/001.mgz /scratch1/03201/jbwexler/openneuro_derivatives/derivatives/fmriprep/ds003669-fmriprep/sourcedata/f…
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Potential clarification is needed on the documentation for MANIFESTATION. Element E01C02.1 references the code list MNI, however, the hyperlink to the MNI code list is broken. This is because the MNI …
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**Describe the bug**
This is prob. not a bug, but I was wondering about this recently & I´d great to get feedback and your ideas.
As far as I understood correctly, Schaefer atlases are directly…