-
Dear Torsten,
**first of all thanks for your efforts on Prokka ! The whole community owe you one.**
I annotated my assemblies with Prokka 1.14.6 with "--compliant" option.
When uploading the …
-
Add PMID submission to NCBI to pipeline for their linkback to us.
Check with @cmungall and @thomaspd to get the FTP location, creds, etc.
-
(did not auto generate)
Submitter: Marina Nieto-Caballero, 0000-0002-7755-2490
Submission ID: adc54fc8-2c94-457d-9b5c-89d7f005fb59
Has data been generated: Yes
PI name: Marina Nieto-Caballero
PI orci…
-
Submitter: [Anders Kiledal](https://orcid.org/0000-0003-4565-2187)
Submission ID: 5a3fd857-b0e5-4c01-8b48-b95dac0615aa
Have data already been generated for your study?
- No
PI: [Gregory Dick](https:/…
-
Submitter: [Brianna Terry](https://orcid.org/0009-0005-1398-7179)
Submission ID: 4b2aa292-c220-43a6-a71d-d041906f27db
Have data already been generated for your study? : Yes
PI: Jacob Valenzuela
St…
-
slot link_class_info has no guidance or examples.
criteria for completion
- [x] identify how the slot has been used (if at all) in the past, @turbomam provide a query of NCBI?
- [ ] Update nmdc.…
-
Thanks for the great tool! I was wondering if there is a way to get results in gff3 or gbk format to be able to compare annotations and also to be able to submit my isolates in databases like NCBI whi…
-
Hello @kimrutherford and @ValWood, first congrats on managing to pass the submission pipeline!
I noticed that the new submission no longer includes the mitochondrial chromosome sequence. I know tha…
-
(Github ticket was NOT autogenerated)
Submitter: Mariah Donohue, 0000-0002-4311-453X
Submission ID: 3b764499-ac47-4247-bee9-4ce277b32102
Has data been generated: Yes
PI name: Mariah Donohue
PI orcid:…
-
This is a newer milestone. Related to...
Workflow Data Management
The files and metadata generated by the NMDC workflows are available to the community in the Data Portal. In the Pilot we developed …