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```bash
wget https://github.com/neherlab/pangraph/archive/refs/tags/0.5.0.tar.gz
tar xzvf 0.5.0.tar.gz
cd pangraph-0.5.0
docker build . -t pangraph/pangraph
```
```bash
# All requested packa…
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It's likely I missed something in the documentation, but how do I get my custom datasets to appear in the dropdown menu? I can navigate manually to the datasets I want via the correct url, e.g. localh…
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**Current Behavior**
When selecting divergence as opposed to time for `branch length`, minor gridlines at spacings smaller than 1 mutation can be shown. This makes no sense as mutations cannot occu…
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We currently report mutations relative to the reference sequences and relative to the nearest node in the reference tree, called private mutations. The former are derived straight from the alignment, …
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Hi,
Would you mind adding the function of "Max treatment capacity", eg ventilators available for Covid-19 cases, and a death-rate for patients which can't be treated due to being over the capacity of…
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I've noticed that the frequency panel is very laggy even on high-end hardware when there are 2000 possible colorings (as for Nextclade lineages) in the Europe build: https://nextstrain.org/groups/nehe…
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Hello,
Do you consider adding binary alignement / models ?
Thanks,
Adrien
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# 🐛 Bug Report
We noticed that, for some reason, JSURL "'" converted to "%27" in the address bar of Chrome (Windows, not sure about Mac). The Firefox displays "'".
However, copy-pasting the …
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I got this error from refine that I struggled to debug:
```
ERROR: SequenceData: loading alignment failed... builds/masked.fasta
ERROR from TreeTime: This error is most likely due to a problem wi…
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Hello,
I had panX some weeks ago and it was working perfectly, but I had to run tun the analysis again to add some new sequences. So with my new, larger dataset it does not work anymore.
When I tr…