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Hey,
I have played around with the Vista3D model as I want to pseudolabel a few CT images from the LIDC dataset for MAISI. Unfortunately, I am encountering a problem where the segmentations look qu…
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Hi,
I would like to use mri_conv to import NIfTI/json (not organized in BIDS ).
When I export the data (via the basket), the json is copied as is and therefore does not have the same format as…
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For a single subject, automated detection of suffix does not work. Can we handle typical expected suffixes like _T1?
```[tasklist]
### Tasks
```
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Our test suite is getting slower.
See stats over the past year (same thing for windows, macos has a discontunuity most likely due to an infrastructure change on the github side)
.
To compute metrics with the official package:
```
pip install inpaintin…
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It would be useful for validation purposes to have a NIfTI-1 example file. This will help tools attempting to read files distinguish the failure cases of misparsing the extension or misparsing the NIf…
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**Describe the bug**
While trying the [Quick Start Guide](https://openfl.readthedocs.io/en/latest/get_started/quickstart.html#creating-a-federation-in-5-steps) for model **tf_2dunet**, the plan initi…
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### Describe the Bug
We converted some input nifti files to dcm. We then run the files through a model and get the segmentation. We converted the segmentation as well into dcm. Using the ohif viewer …
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My nifti images (4D) wich are the output of the trained network have different size size of their reference dicom format images. How could I use your library? I tried and I always receive the error of…