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Dear FRASER2 team,
I am currently trying to use FRASER2 to analyse RNAseq data (mRNA and totalRNA), from muscle biopsy samples. I have been trying to reproduce the vignette on my data and I was sur…
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Hello,
I am interested in adding p values and p values for interaction. I can't figure out how.
Has anybody solved this?
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Hello, I would like to ask you another question. How is the p-value in your experimental data calculated? What data is used for the calculation, and what method is used for the calculation? Your answe…
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### Contact Details
_No response_
### Bug
It seems an update to Infer package makes the following code obsolete. If so, the tutorial is much worth an update.
gender_discrimination_perm |>
vis…
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Hi, thanks for a great package! I am working with a brain snRNAseq dataset and have run scDRS to test for the enrichment of MDD, ADHD, ALZ, MS, SCZ, and height GWAS hits (using the MAGMA scores from y…
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I'm not sure whether there is an error in the calculation of p_value of the code.
As the following figure shows, the p_value is calculated by the mean value of the synthetic control group's predictor…
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Hello,
I run into this issue with my dataset during normalisation using som.norm()
`/home/ubuntu/anaconda3/envs/somde/lib/python3.8/site-packages/pandas/core/internals/blocks.py:402: RuntimeWar…
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How to get chart with P-Values.
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### What happens?
`fit_power_law()` no longer returns a `KS.p` component.
### To Reproduce
## igraph 1.6.0
``` r
options(conflicts.policy = list(warn = FALSE))
library(igraph)
g [1] FALSE
#…
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### 🐛 Describe the bug
Passing this tensor of complex numbers with a large p value to torch.nn.functional.normalize produces nan values on cpu, but eliminating the imaginary part results in 0 in thos…