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![bray](https://user-images.githubusercontent.com/102775904/170952236-ad90b980-657c-48f6-a7a3-9f9e05f028fc.png)
% 값을 찾아서 PC1 이런 식으로 나타내기
center 찍고 line 긋기?
군 두개씩 차이를 보여주는 방법??
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maybe just good old fashioned PERMANOVA.jl
Easier for people to find, much as I enjoy the imagery of The Hydra
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I want to get information about the significance of differences between each pair of groups in my dataset. Currently, the statistical output of MicrobiomeAnalyst (Web and R) is only the string stating…
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I am working with a data set with an unbalanced sampling design that violates the assumption of homogeneity of group dispersions. I was informed that one can modify the source code for the adonis() fu…
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0) needs replication at the tree scale
1) for each tree, build a vector of the number of n-wise co-occurrences
2) build a tree by co-occurrence pairs/groups matrix
3) test for genotypic effects using …
MKLau updated
10 years ago
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It would be really nice to have a permutative post-hoc test equivalent (like the Turkey test) for distance matrices.
The implementation seems to be similar to a t-test, although the Mean Standard Err…
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Hi,
Thanks so much for your contribution to this function. I would like to perform a pairwise adonis test with phyloseq object and a bray distance matrix but I have some problems when I ran the co…
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**Is your feature request related to a problem? Please describe.**
Significance testing for alpha (ANOVA) and beta diversity (PERMANOVA) for categorical variables should be included in MMEDS summarie…
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## ToDo
- [x] Add our custom pkgdown theme (https://github.com/vallenderlab/vallender-pkgdown-theme)
- [x] Add vignettes
- [x] Ensure changelog/news.md is added
- [x] Order functions into groups…
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Hi,
Thanks for your amazing work.
I was wondering if you know any method that can reliably produce p-values using the ideas' distance when number of replicates in each group in less than 5? Sin…