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When downloading phenotypic data via either the search wizard or trial detail page, I would like the option to download management factors associated with that data level.
It would also be nice to…
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We keep encountering TSVs that have a participant ID column without the `sub-` prefix required for BIDS subdirectories.
This makes sense, as most likely the phenotypic/tabular data will have preceded…
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On /breeders/trial/, will this delete images?
![image](https://github.com/user-attachments/assets/13d16733-3ab7-421f-b399-0ee8abf3d52c)
If not, how do I purge associated images? It seems like i…
ch728 updated
1 month ago
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https://github.com/bids-standard/bids-validator/blob/2d923f501bcf97b14e612833fb1bcb3af39f2b67/bids-validator/bids_validator/tsv/non_custom_columns.json#L68
In BIDS we have `phenotype/.tsv` but not …
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Hi,
I use compass with mosaic from proteogenomic data. I would like to reuse the compass data (small sub-clones) with the phenotypic data to analyze the protein expression of the sub-clones. Is this …
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Currently if you have about 5% phenotypic data, then later on when you are doing test/training datasets you end up running out of rows of data to subset down to.
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Hi, I am interested in using BLINK to run GWAS. I have pure lines with phenotypic data from 6 replicates of trial screenings. After reading the documentation I am unsure in my scenario if I am limited…
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Hello,
Good work! I'm very interested in your work. The images and phenotypic data are not available at https://figshare.com/account/home#/projects/141743. The folder is empty. When will you m…
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Both the imaging and phenotypic input schema require `participant_id` and `session` columns to be present, but currently the dashboard does not check whether there are any missing values in these colu…
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### Title
Enabling subject queries based on longitudinal phenotypic data across datasets
### Leaders
Sebastian Urchs (@surchs on GitHub/Mattermost)
Alyssa Dai (@alyssaydai on Twitter/GitHub…