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> Next-generation sequencing (NGS) technologies have enabled affordable sequencing of billions of short DNA fragments at high throughput, paving the way for population-scale genomics. Genomics data an…
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Hi Martin,
My popgenWindows.py doesn't work, the code i typed in is :
python ./genomics_general-master/popgenWindows.py -w 50000 -m 5000 -g combined.geno.gz -o output.csv.gz -f phased -T 20 -p MA…
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Hello,
I am using MSMC2 to infer split times between several populations, and when it comes to converting the time boundaries output by MSMC2 into years I see that there are two formulas available:…
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**Coach assistant:** @effendivina
**Sanity checks:**
* [ ] GitHub profile photo + detailed profile description
**Organizations:**
1. Canadian Centre for Computational Genomics
2. Stony B…
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**Lightning talk:** "phASE-Stitcher: A tool for phasing genome wide haplotype in F1 hybrids using Phase Informative Reads"
**Authors:** Bishwa K. Giri, Dr. David L. Remington
**Abstract:**
Next …
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Hi, does it run with the latest Snakemake v.8 release, given the deprecated elements?
Also, are there other third party utils included besides CLI and the Gnomad (not already in the DESCRIPTION file)…
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Hi,
im using rfmix v2 for cattle population genomics, and really enjoy it!
I have SNPs from whole genome sequence from several populations and im playing around with the tool to infer introgress…
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Some places to start looking include:
- [Colorado Dept. of Public Health Covid data](https://covid19.colorado.gov/data): Lots of different datasets link out from this page or other CDPHE pages, in…
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The LoF project team have now shared their complete dataset with us for downstream use. The plan would be to add these data to the variant page (annotation).
I open this ticket for our own records an…
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Hi Martin,
I have a bug in fourPopWindows.py. Could you assist with that, please?
Traceback (most recent call last):
> File "fourPopWindows.py", line 345, in
> for window in windowGenerat…