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slowkoni
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rfmix
RFMIX - Local Ancestry and Admixture Inference Version 2
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Easybuild recipe
#48
la-mendicino
opened
4 months ago
0
Ideal referent variant amount and genetic map to speed up analysis.
#47
nick338
closed
11 months ago
4
not producing any output file even after waiting for 3 hour
#46
Shaileshdesai76
opened
1 year ago
2
Convert RFMix 2.0 output into RFMIx 1.5. Viterbi output?
#45
MrLocuace
opened
1 year ago
1
Output error
#44
xuefenfei712
opened
1 year ago
0
Segmentation during scanning for optimal CRF weight
#43
kuangzhuoran
opened
1 year ago
4
Unable to handle the swap of REF/ALT allele?
#42
eldronzhou
opened
1 year ago
0
Does not build on Apple M SOC
#41
thebigcorporation
opened
1 year ago
0
Add docker target to Makefile; run autoupdate
#40
thebigcorporation
closed
4 months ago
0
Chromosome X
#39
eberlepe
opened
2 years ago
0
Matching my sample data and reference data
#38
dongleihu
opened
2 years ago
0
Fail to install
#37
xiw588
opened
2 years ago
0
Assertion failed: (n_ref != 0), function add_node, file random-forest.cpp, line 248.
#36
Wei-Chen-Pan
closed
2 years ago
1
Update docs
#35
BJWiley233
opened
2 years ago
0
Stuck after internal simulation of samples
#34
FranjoIM
closed
2 years ago
2
Haplotype order
#33
JiawenChenn
opened
3 years ago
1
Unexpected global diploid results.
#32
mfknie
opened
3 years ago
1
Helping in installing on a Mac machine
#31
guidebortoli
closed
3 years ago
0
msp file and reference ancestral populations
#30
astockwell1
closed
3 years ago
0
RFMix SetUp and Population Issue
#29
gabopg97
opened
3 years ago
0
Aborted (core dumped)
#28
wangtao-prog
opened
3 years ago
2
Start position in msp file
#27
murielgb
opened
4 years ago
0
reference haplotypes reanalyzed but missing in the <ouput>.msp.tsv file
#26
sroliveiraa
opened
4 years ago
0
whole genome level ancestry feature from version 1 missing
#25
raqueldias
opened
4 years ago
1
Program keeps crashing when generating simulation samples on RFMIX v2.03-r0 but not RFMIX v2.02-r1
#24
deven-n-vyas
opened
4 years ago
2
Output fitted theta parameter files
#23
LuZhangH
opened
5 years ago
0
Can rfmix be used in other species except for hunman
#22
liufy11
opened
5 years ago
1
output sis.tsv and interpretation
#21
laurabuggiotti
opened
5 years ago
1
Informations about simulate tool
#20
jcgrenier
opened
5 years ago
1
Segmentation during scanning for optimal CRF weight for certain chromosomes only
#19
rozaimirazali
opened
5 years ago
4
Pruning variants
#18
jasmine-alvarez
opened
5 years ago
0
The .msp.tsv file
#17
rozaimirazali
closed
5 years ago
1
STOP: genetic map for chromosome is not strictly increasing.
#16
rozaimirazali
closed
5 years ago
2
RFMix Output Format (for v1)
#15
cwarden45
closed
5 years ago
10
segmentation fault
#14
cwarden45
closed
5 years ago
4
Stopping at "Growing forests"
#13
alessandrotestori
opened
5 years ago
0
local ancestry for each input snp
#12
complexgenome
opened
5 years ago
2
Aborted (core dumped)
#11
XuexueLiu
opened
5 years ago
7
Likely errors near telomeres and centromeres
#10
mocksu
closed
5 years ago
1
How to visually display the chromosome ancestry segments?
#9
mocksu
closed
5 years ago
7
map file?
#8
complexgenome
closed
5 years ago
2
phase correction?
#7
vacanfield
opened
6 years ago
11
RFMix_PopPhased skipping growing forests
#6
angelcymak
closed
6 years ago
4
Stuck at generating simulation samples
#5
antmarge
opened
6 years ago
8
Added build instructions
#4
hguturu
closed
6 years ago
0
RFMix make
#3
ftlin22
closed
6 years ago
6
Dr reformat fb output columns
#2
davidriccardi
closed
7 years ago
0
How to install?
#1
silvewheat
closed
7 years ago
1