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**Is your feature request related to a problem? Please describe.**
Rust-bio contains the ability to provide easy %GC with a simple command but what about the other interesting parameters
**Descri…
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* **InterPro ID / label**
GO:0000387 | spliceosomal snRNP assembly | IEA with IPR034100
* **Example sequences with problematic annotation (ID + gene/protein name):**
https://www.pombase.org…
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Hi,
I am processing lots of sequences in a fasta file but esm3-small model failed on the sequence "EHVAATHKTGLDALAELTGAALNSVEKLSELQFQTVRASLEDSTEQGKRVFDARSLHELTALQSEVSQPTEKLVAYGRHLYQIAAGTHAEWRKVAQTRA"…
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Hiya，
When I run `snakemake -j 64 --use-conda` with example data, I ran into this error:
localrule antismash:
input: intermediate_files/annot/syringae_UMAF1029_O/Pseudomonas_syringae_UMAF1029…
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* InterPro ID / label
IPR000104
* **Example sequences with problematic annotation (ID + gene/protein name):**
* IPR000104
Antifreeze protein, type I may be connected to MF GO:0016172 antifreez…
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* **InterPro ID / label**
- | GO:0006397 | mRNA processing | IEA with IPR039727
* **Example sequences with problematic annotation (ID + gene/protein name):**
https://www.pombase.org/gene/SP…
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Hi, I have a corpus of about 500,000 protein sequences and would like to apply them to existing models like ESM2 or this one for predicting the fitness effect of changing an amino-acid for another.
H…
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* **PTHR ID & PTN node:**
GO:0006696 | ergosterol biosynthetic process | IBA with PTN000825284 , S000004821
* **Sequences with problematic annotation (ID + gene/protein name):**
erg12 https…
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Hi!
I need to compare two protein sequences. NCBI's blastp has the comparison results, but Diamond can never find the results. Is it that my parameters are set incorrectly?
The two sequences that ne…
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When uploading a FASTA file, I noticed that hc.fasta includes not only the WT sequence but also all the variant sequences. I’m wondering if it’s sufficient to upload only the FASTA file containing the…