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**Is your feature request related to a problem? Please describe.**
Absolutely. Compositional data analysis [CoDA] is large in fields such as bioinformatics, geology, and economics.
> In statist…
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A lot of the times when we are assessing our samples before we move on to fragmenting cDNA in to fragments, we look at the distribution of full length cDNA using a Bioanalyzer.
See for example panel …
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Hello, and thanks for your repository.
I have been looking at the data, and I see that all abundances accessible are relative abundance. I haven't found any way to download counts data. Is count dat…
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Hello and thanks for the great package.
I am producing a heat tree matrix of differential relative abundances in fungal taxa. I would like to display differences in taxa down to the order rank, how…
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Hello,
I have a subsetted phyloseq object "x", containing 9 taxa.
I've created relative abundances of the read data (using ```microbiome::```), so when running ```otu_table(x)``` I get relative…
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Tried to use pyigm_fitlls to fit a LLS. Can load OK the spectrum, but then had several errors (note that pyigm_fitdla seems to work fine, see below).
First it could not find pyigm/data/fN/EW_SPLIN…
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**Describe the parameter code you need**
Metabarcoding datasets usually come with relative abundances in terms of sequence reads per ASV or OTU. This is a request for terms for:
- Total abundanc…
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I have received a revision to my manuscript to synthesize the microbiome data through a microbiome-based simulator, and I find your tool useful. Since I have a few days left for submission I am contin…
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Would be great to have for newcomers who don't necessarily know how to dig into the code yet.
Current docstring info when using Korg in python via juliacall (0.9.15):
```python
Signature: Kor…
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We could use the approach from Steffensen et al. 2017 (linear relationship between CPUE and RD abundance estimates) to provide presumably more accurate initial abundances by segment and origin given t…