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'Omics terms can be difficult to learn. Having them described in a single page may help new comers to overcome this barrier quickly and transfer knowhow that may be a pain to transfer through more for…
meren updated
2 years ago
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Hello all,
Just wanted to let people know what tools I'm working on (or might work on in the future), in case anyone else is interested in these.
I'm concentrating on RNA-seq/ChIP-seq/ATAC-seq wo…
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## New term
* Submitter: Ben Norton
* Efficacy Justification (why is this term necessary?):
1. Eliminate the ambiguity in the preparations property by atomizing the information into a more logic…
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VR needs to have a path for representing translocations.
Allele is currently defined as a contiguous sequence change at a single location. Translocations and junctions are unlikely to fit in that m…
reece updated
6 months ago
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We spoke to multiple group leaders at the Crick about their experiences in running projects with computational biology, using specific tools, and their opinions of projects and work within the Crick I…
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This is not really an issue, just a suggestion -- hope all is well!
We are finding new ways to use SEEKR by specifying custom alphabets. In these experiments, we are encountering words or k-mers th…
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> _**This task force is coodinated by:** @chrisvdt and @lzehl
> **Instructions for contributing:** The first comment provides description of the issue and meant to trigger discussions and collect po…
lzehl updated
2 years ago
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Dear @AntonPetrov et al,
I am trying to use R2DT to visualize secondary structures of non-coding internal transcribed spacer 2 (ITS2) sequences in a standard layout for evolutionary/phylogenetic an…
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Hi @edwintse @TomkUCL @lindapatio @jemimahaque
We need more about the project on the wiki - describing the story so far.
https://github.com/StructuralGenomicsConsortium/CNP4-Nsp13-C-terminus-B/…
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Beginning with sequence-based searches of the literature via PaperBLAST and using the sequences acquired from PomBase, UniProtKB