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### Please link to the GitHub Discussion for this proposed analysis.
https://github.com/AlexsLemonade/OpenScPCA-analysis/discussions/635#discussioncomment-10140478
### Describe the goals of this ana…
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### Discussed in https://github.com/uclahs-cds/public-R-CancerEvolutionVisualization/discussions/46
> @lydiayliu Not that it really matters for the visualization, but cellular prevalence is the propo…
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I note that Deepcell provides both a segmentation (nuclear channel only) and mesmer (nuclear and cytoplasm) model (https://www.deepcell.org/predict)
Our datasets do not have a single general cytoplas…
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Hello,
Thank you for the amazing tool. It works really good. I have 2 particular questions.
I have 2 big datasets, primary lung adenocarcinoma tumor and brain metastasis of lung adenocarcinoma.
Th…
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does it make sense to make an object of sorted samples that should contain a specific cell type and another object from a different study that contain a different cell type and do cell-cell communicat…
Flu09 updated
6 months ago
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Project UUID: 8c3c290d-dfff-4553-8868-54ce45f4ba7f
Project Title: Melanoma infiltration of stromal and immune cells
Project Short Name: Mouse Melanoma
Submission UUID: 4756b97c-3666-4ff0-9c48-611d…
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The "Mouse Melanoma" dataset is ready for secondary analysis.
**Project title**: Melanoma infiltration of stromal and immune cells
**Project short name**: Mouse Melanoma
**Project UUID**: 8c3c290…
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Hi,
Thank you for the great software!
I wonder if the consistency of cell type proportion can be used to evaluate the success of cell type deconvolution in my study. I observe the following re…
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Dear @sqjin,
Thank you very much for CellChat. I'd be grateful for your advice on normalisation when merging different datasets from which to then create a CellChat object.
I have two dataset…
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fibrocyte
http://purl.obolibrary.org/obo/CL_0000135
An inactive fibroblast; cytoplasm is sparse, endoplasmic reticulum is scanty with flattened nucleus. Term used by some histologists; when fibrobl…