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### Description of feature
While not necessarily required, these can fit some recommended protocols by vendors like KAPA, (cf. "KAPA Bioinformatics Analysis for Longitudinal Detection of Circulating …
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Currently, I have been using ichorCNA for cfDNA analysis in HCC. However, results of several patients showed that their tumor fraction equal to 0. Is there a theoretical threshold for ichorCNA detecti…
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Hi,
I am interested in detection of Somatic SV's for my tumor (mate-pair data) samples. I would like to know whether I go for a separate run for Tumor and Blood or I can run both the samples in a Tumo…
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Sorry for asking this question,
My training set is CT images consisting of kidney and kidney tumor, whose ground truth is labeled in voxel level. Now I want to do 3D object detection of tumor. I'…
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## Project Request
Creating multiple machine learning models to classify brain tumors given images of brain scans.
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| Field | Description |
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I concatenated the germline and LOH variants called by VarScan and used that in cnvkit call. A 43Mb region was called as a deletion with BAF=0. However, by looking at the SNPs that are 0/1 in normal s…
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Thanks to the authors for the interesting work and for sharing your code.
I'd love to reproduce the results presented at MICCAI23. However, I couldn't find `best.pt` following the link from your doc…
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Is it possible to utilize your tool for the detection of TCRb in bulk tumor rnaseq data(ie without enrichment of tcrs)?
In case, do you think that it is necessary to change any parameter respec…
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Hello,are you using the via tool to mark comments that manually label the images in the t1ce folder?
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(Posting here because the forked repo doesn't have issues: @gavinha, you might want to enable them)
A couple of papers suggested that selecting DNA fragments that match nucleosome size, or slightly…