-
I am seeking clarification on the `AverageMeter` and metric reduction implementations in [3d_segmentation/swin_unetr_brats21_segmentation_3d.ipynb](https://github.com/Project-MONAI/tutorials/blob/main…
-
1. Trans-Unet https://arxiv.org/abs/2102.04306
2. U^2-Net https://arxiv.org/abs/2005.09007
3. Restormer https://arxiv.org/abs/2111.09881
-
**Describe the bug**
I evaluated BTCV dataset using below SwinUNETR codes and pre-trained model of 'Swin UNETR/Base' (swin_unetr.base_5000ep_f48_lr2e-4_pretrained.pt)
https://github.com/Project-MONA…
-
Currently quite a few bundles use
the inverted version of preprocessed original labels as the reference during evaluation:
https://github.com/Project-MONAI/model-zoo/blob/987f49fe9e0f20f047a2252c…
-
when I load UNETR pretrained model from https://drive.google.com/file/d/1kR5QuRAuooYcTNLMnMj80Z9IgSs8jtLO/view?usp=sharing, I got error:
> raise RuntimeError('Error(s) in loading state_dict for {}…
-
(monailabel) huyao@vvm-XPS-8960:~$ monailabel start_server --app /home/huyao/apps/monaibundle --studies /home/huyao/data/Task08_HepaticVessel/imagesTr --conf models swin_unetr_btcv_segmentation
Using…
-
(aug_29) test_user@ncaiirl-Z490-GAMING-X:~/Desktop/junken$ python /home/test_user/Desktop/junken/jul_25/swin_unetr_run_in_terminal_25th_jul.py
MONAI version: 1.2.0
Numpy version: 1.25.2
Pytorch ver…
-
I am currently trying to train different architectures within nnUNet platform to compare with nnUNet baseline architectures. I believe it should be convenient to use same preprocessing steps before co…
-
Hello. I'm running the code in a notebook in Google Collab and I just changed the parser = argparse.ArgumentParser section in the Training settings. But the main part does not show the training steps …
-
**Is your feature request related to a problem? Please describe.**
Currently MONAI bundle allows user to define their components (class) and supports the initiation of the class from the bundle tem…