-
Alex moved basic explanation about modules into methods and suggests to delete the first paragraph in the main text.
AA: looks weird to me like that - like better the old version with only methods i…
-
Maybe we should go ahead and use the term “correlated gene expression”…?
Coexpression has connotations of pairs of genes.
The same term ‘correlated gene expression' was used by Richiardi…
Worth thi…
-
* PyNets version: 0.1.0 (2017-08-23)
* Python version: python3.5 (though 2.7 also installed on server)
* Operating System: Ubuntu 16.04.3 LTS
### Description
PyNets was crashing with both exam…
-
From http://joss.theoj.org/about#author_guidelines:
> *What are your requirements for submission?*
>
> - [x] Your software should be open source as per the OSI definition
> - [x] Your software…
-
1. Only allocate and fill the '`counts`' matrix if it's required (mean edge-wise statistic)
2. Vectorise symmetric matrix data using `Mat2Vec` class; build and write one row of data to file at a ti…
-
The current pysurfer code to use traitsui involves strange hacks to make the GUI busy for a short time while X renders the mayavi window but also without causing the GUI to enter an event loop and blo…
-
(From the other thread since it was closed.)
Sorry I was out of town last week. Getting what appears to be the same error, I should be able to just delete the PyNets directory and clone the git aga…
bth22 updated
7 years ago
-
Hello,
I was just starting to test-drive the package and it looks promising. I wondered if you had some information about typical processing time (especially as it scales with atlas complexity, and…
-
Although I understand that it is best to use CPAC only (so as to have a self-contained description of everything that was done to the original data) is there a way to feed already "minimally preproces…
-
I was reading the code and it turns out that motion correction is performed twice (both of the times with "--twopass" argument so four times in total): https://github.com/preprocessed-connectomes-proj…