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https://linkml.io/linkml-owl/examples/
I quite relish YAML (I started the YAML-LD WG, which is part of the JSON-LD CG).
I like the idea of being able to write
```yaml
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id: x:a
label: fo…
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In a fresh (empty) virtual environment am trying:
```
pip install -U pip
pip install -U schema-automator
```
Strangely some dependency conflict precludes installation of 1.3.5 linkml.
```
p…
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See Part 6 of the specification: https://linkml.io/linkml-model/docs/specification/06mapping/
Collections can be serialized in different *forms*:
| Form | JSON …
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given that a principal use case of our schema-as-software (the importable `nmdc_schema` package) is to support the maintenance of schema-conformant databases (e.g. `nmdc:Database` JSON), it seems reas…
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Using JSON schema iSamples (github-- [isamplesorg/metadata/src/schemas/iSamplesSchemaCore1.0.json](https://github.com/isamplesorg/metadata/blob/main/src/schemas/iSamplesSchemaCore1.0.json)
get met…
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LinkML provides facilities for automatic generation of web documentation about a model, from the annotation of the model in the core data schema (YAML) file. A recent example of such generated docum…
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```shell
poetry run linkml-sqldb dump \
--db data_7.db \
--target-class Database \
--schema src/schema/nmdc.yaml data_7.json
```
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The postcoordination properties are needed to create the logical definitions. They are already extracted in the OWL file referenced below. We can include this OWL file directly in the content model, o…
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In order to interpret a measurement correctly, it is crucial to know if any treatments were applied at the time of measurement, and if so, which treatments and over what period of time. Currently, tre…
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OAK has a new but very experimental validation interface:
https://incatools.github.io/ontology-access-kit/interfaces/validator.html
We should start exploring that for QC rather than adding sparq…