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Hi !
I'm trying to run Canu on HPC and since Canu can "query the system for grid support, configure itself for the machines available in the grid, then submit itself to the grid for execution" I wo…
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https://mp.weixin.qq.com/s/A10jVJL94BLLpE1BfKt4Tg
ixxmu updated
2 years ago
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## Preferred term label
10x multiome
## Synonyms
Chromium Single Cell Multiome ATAC + Gene Expression
## Textual definition
Simultaneous profiling of gene expression and open chromatin …
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Hi there,
I am running Canu 2.2 and having a problem submitting jobs to the grid (slurm).
Would you please let me know if the grid setting is wrong? and how to solve it?
The commands I used:
`…
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Some notes:
- We have canu 2.2 installed are unsure why it says 1.9 when we run it.
- We have already successfully sequenced this data file with canu and are trying to reproduce the results. Unsure…
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Sorry for this easy question, but I am confused by these two parameters.
The explainations of thses two parameters are `Limit reads used for correction to supporting at most this coverage` and `Lim…
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From a comment by Mathieu of vidjil group:
In particular, we used the `duplicate_count` key to describe the number of reads gathered in each clone, as you suggested us in your previous email. To en…
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Hello,
I have ONT reads that are mostly uncharacterized. Then I have two questions:
How is it possible to set kmer size for trio-binning, and, is it possible to use the -c (homopolymer compressi…
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| Name | Description | Size | Format | URL |
| --- | --- | --- | --- | --- |
| World Bank - Light Every Night | Light Every Night - World Bank Nightime Light Data – provides open access to all night…
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### Enzyme, ADAR (proof-read and correct mistakes in RNA)
[**ADAR editing enzymes** are found in all multicellular animals and are conserved in sequence and protein organization. The number of ADAR g…