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Branching off from https://github.com/nf-core/modules/issues/4080#issuecomment-1834199834
Documenting a chat with @drpatelh
The issue used to be that the conversion from docker container to `si…
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So far the simple workflow implemented with Singularity containers and a Bash script is only tested on ParallelWorks platform. This needs to be tested on other HPC platforms as well. This Issue tracks…
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We're running docker containers with Singularity and we're using `registrator` to register these container services in consul.
I would like to deploy some of these containers with docker network=HOS…
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As discussed in https://github.com/compose-spec/compose-spec/issues/57#issuecomment-617183714, [singularity-compose](https://singularityhub.github.io/singularity-compose/#/) is a simple orchestration …
vsoch updated
4 years ago
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I get this error after updating and committing to master
WARNING: Hard-coding image build instead of using Conda build - this is not recommended.
https://github.com/BioContainers/multi-package-con…
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### Version of Apptainer
What version of Apptainer (or Singularity) are you using? Run
`apptainer --version` (or `singularity --version`).
```
$ apptainer --version
apptainer version 1.1.3
…
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### Description of the bug
When attempting to download the nf-core/nanoseq v3.1.0 workflow for offline use with the option to save Singularity images (`nf-core download`) , the image `biocontainers/b…
pcrxn updated
10 months ago
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Hello
First - Thanks for a fantastic work on sregistry and the client!
My issue: I have a running sregistry and my singularity global client seems to work fine. I can push/pull images to/from the …
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Hi, I'm trying to build a Singularity and push it to Github Container Registry using one of the Github Actions workflow provided in this repo as a template.
I run a modified version of the "Docker"…
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Write some documentation which serves as a centralized location for listing ML environments/images. Some ideas would be:
- Point to LCG documentation and list some images or types of images which hav…