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Please enter your suggested changes or comments here. If your comment relates to a specific term, please provide the PathGO id or rdfs:label of the term in addition to your comment.
For new term r…
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I make a directory called genomes_dir in the data directory. Then I do:
```
python download_genomes.py 'mycobacterium tuberculosis/kanamycin/metadata.tsv' genomes_dir
```
at the end of the downlo…
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* [x] SARS-CoV-2: [bbbq_1_covid_only.zip](https://github.com/richelbilderbeek/bbbq_article/files/5194280/bbbq_1_covid_only.zip)
* [x] Mycobacterium tuberculosis
* [ ] Homo sapiens, undoable
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I have assembled fastq paired end reads using spades and when running pgap genome size check fails. What can I do to improve the assembly so that it is within the range of accepted genome size. I remo…
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Hi, I have some problems about using DeepBGC to identify the BGCs in [Mycobacterium tuberculosis H37Rv (high GC Gram+)](https://www.ncbi.nlm.nih.gov/genome/?term=Mycobacterium+tuberculosis).
Here …
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I am not 100% sure whether this is a bug or just an unexpected behaviour ...
I am using Mykrobe 0.8.1 with Mac OS X Catalina.
I have a folder containing three BAM files:
```
Taras-iMac:BAM a…
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Moved from https://github.com/hadley/dplyr/issues/897
I think the default display of tibbles could be improved if each column highlighted 3 (say) significant digits, by printing all other numbers in …
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Hi, I'm actually using your programm but I found some issue such this one:
```
INFO: Starting testing: Sat May 12 20:50:59 2018
Traceback (most recent call last):
File "/pandata/me/LEPIWASP/bl…
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Hi,
I am getting ≃ 2.5 more duplicates marked in `snap paired with -so parameter` than with `snap paired without -so option + pipe to samtools markdup or picard MarkDuplicates`.
Stats obtained with …