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Sub-lineage of: B.1.617.2 Clade 21J (223 sequences)
Earliest sequence: 08.2021
Most recent sequence: 10.2021
Countries circulating: Israel (210),USA (6),France (4),Germany (2),UK (1)
The importa…
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Hi,
Since this week I have an assignation 20A for certain sample that are supposed to be 20C if you have a closer look of the SNP list.
I also re-run certain sample from last week that had a 20C…
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Digging into the nexstrain build of Instituto Ricardo Jorge ( https://insaflu.insa.pt/covid19/ )
I spotted a big sublineage with
N:Q9L + Orf9b:56C
then
Orf1b l829 S:T95I
circulating in europe
…
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Description
Sub-lineage of: AY.4 (3544 sequences on GISAID as of 2021/10/18)
Earliest sequence: Denmark, 08.2021
Most recent sequence: Denmark 10.2021
Countries circulating: Mainly Denmark
Muta…
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AY.32,as described in issue #209 is a "bi-headed" large lineage from South Africa and Sri Lanka (plus Maldives),
the defining mutation should be T572I
Actually defining mutations fail to assign i…
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New lineage proposal
by @CorneliusRoemer
Description
Sub-lineage of: B.1.617.2 (21J)
Earliest sequence: Unclear, due to faulty dates in some sequences
Most recent sequence: Current
Countries c…
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Prevalent mostly in France, Switzerland, Germany, Italy
![image](https://user-images.githubusercontent.com/25161793/142504019-916cae8f-c047-4ca6-829e-e8834c0f69b3.png)
![image](https://user-imag…
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New lineage proposal
by @CorneliusRoemer
Description
Sub-lineage of: B.1.617.2
Earliest sequence: March to June 2021 in Peru/Chile
Most recent sequence: Current
Countries circulating: ~30% in …
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New lineage proposal
by @CorneliusRoemer [after tip off from @gerstung-lab about nuc:15240T branch]
Description
Sub-lineage of: B.1.617.2 (21J)
Earliest sequence: March to June 2021 in Peru/Chil…
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By Gabriela Ribeiro, Alex Ranieri Lima, Svetoslav Slavov (Butantan Network for Pandemic Alert of SARS-CoV-2 Variants, São Paulo)
We observed an interesting clustering of the AY.43 lineage which mig…