-
### Description of the bug
I'm getting an error from mosdepth in the process NFCORE_RAREDISEASE:RAREDISEASE:QC_BAM:MOSDEPTH on the dev branch.
### Command used and terminal output
```
[fa2k@nepe 06…
-
Hi,
(Further to the DIRAC user workshop) these are my ideas for modifications to DIRAC to add container support for discussion...
[For GridPP we've got a workaround for the containers now, so th…
-
From the SC21 BOF:
> ### Where should we focus efforts on future lessons?
>
> * Containers (74%)
> * MPI Framework (59%)
> * Python language (59%)
> * Dask framework (19%)
> * Julia language …
tkphd updated
2 years ago
-
https://github.com/datalad/datalad-container
Although used/tested in real life with singularity containers, there is preliminary proof of concept support for docker. This way you can keep your dock…
-
Running following reproducible script (make it into a smoke test?! data is already defaced so either bidsonym should crash informing about that or at least should try to deface I guess):
```shell
…
-
# Singularity Desktop for macOS
Since Spack supports builds on macOS, Singularity now offers a macOS release (Beta Release) allows Linux-based Singularity containers to be designed, built, tested,…
-
**Is your feature request related to a problem? Please describe.**
Using singularity containers for a large number of rules requires that if I am storing DBs outside of the current structure (Say in …
-
- [ ] Can `runc` work with Docker containers, images, and `Dockerfile`s that already exist?
[`skopeo`](https://github.com/projectatomic/skopeo) can be used to convert between Docker and OCI ima…
mr-c updated
11 months ago
-
Copy logic from https://github.com/common-workflow-language/cwl-utils/blob/e1f35313d8357273ee7a10e54b3d634c3eb6252a/cwl_utils/image_puller.py#L71 (but use the cwltool data structures, not the nice Pyt…
-
Hi folks,
I'm testing the deployment of singularity containers on our cluster.
I set singularity enabled in my job destination, and set the singularity options in the container_resolvers_conf.xm…