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Hello
I intend to use vg giraffe to align the many illumina pair-end short reads and then use vg call to determine the variants. But I actually do not find the way to combine the individual sample vc…
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Dear developer.
I am working on measuring the performance of vg using Illumina Platinum Genome data.
Compared to hisat2, it was confirmed that indel precision in vg was too low.
I used 1KG refe…
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Here is a graph from Ostry (1983) who surveyed variation in keystroke times in continuous copy typing as a function of word length and letter position
Ostry, D. J. (1983). Determinants of interkey …
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### Issue Description
**TL; DR**
Support for MLE, MAP, and Variational inference!
**Context**
In situations where scalability and speed need to be balanced with posterior sample quality, various…
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The graph below shows the telemetry output on the vertical axis (converted to Rotations Per Second) for two motors as the motors accelerate from 400 to 500 using bidirectional Dshot-600. The horizont…
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There is a [growing number of tools for personal knowledge management](https://www.strategicstructures.com/?p=2591), a sizable part of which uses MD with [[wikilinks]]. This includes Obsidian (with ov…
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Dear developers,
Many thanks to your group for providing such excellent tool for RNA-seq analysis. Here i have a question that have confused me quite a while.
I created two versions of genome i…
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Dear curators,
I tried to dig deeper into the nature research paper ([Bradley et al., 2015](https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4703848/)). In terms of mixed infection read analysis, the a…
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As visualization is not straightforward we strongly feel that it needs prototyping. Thus, we have decided to implement it as plugin for IGV.
We need to make some architectural decisions, so we need y…
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## List of keyboard controls (from Input.java in Lizzie 0.7.4):
* e: toggle GTP console
* shift + rightArrow: move branch down
* rightArrow: next branch
* shift + leftArrow: move branch up
* ct…