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Is there any way we can download all the docker images used by sarek locally, and some how change the paths for reading the docker files. Basically I want to run sarek from some server where I do not…
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May I confirm whether this package can be used for get the values of illumina methylation arrays?
If yes, how does it handle the value from the beads and give one value for the loci?
Best,
Xianyin…
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A good starting point is Pfam_SARS. I reviewed it a few weeks ago, and IIRC it has pretty good coverage of Betacov genes, but doesn't include some of the genes towards the 3' end found in other genera…
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Hi SourMash authors,
We recently used your tool to annotate our reads, assembled contigs, and assembled genomes, and found that if we pool all contigs into one fasta, we cannot see the annotate res…
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I'm using iCommands version 4.2.8.
When irepl is provided multiple data objects on its command line, it processes them in the order they appear on the command line. If it processes a data object th…
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Hi,
I just came across this interesting implementation of the ICS method and want to use it for my popgen data. I am generating outputs from SweeD, omegaplus and xpclr but first I am giving it a try …
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Probably a new pipeline entirely, and one that could follow directly after the current single_cell_RNAseq processing pipeline.
The primary goal will be separating outputs from the current pipeline pe…
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### Ask away!
Dear all
I extracted recently str results using GRCh38 reference.
My understanding is that wf_str_repeats.bed is input bed file of straglr genotype stage.
My Questions
1. Does wf_…
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Hello, thanks for your excellent software, It is also pretty helpful to comprehend the associated biological background knowledge. By some related usages and instructions from the internet, I had some…
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Hi. I am trying to run ANGSD on 2 bams with genomic data at 15x coverage/individual to calculate the theta.Unfortunately, when I run the command `realSFS -P 24 outFold.saf.idx >outFold.sfs`, I end up …