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### Deep Learning Simplified Repository (Proposing new issue)
:red_circle: **Project Title** : Monkeypox Detection
:red_circle: **Aim** : Create a image processing model using the DL methods by whic…
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View your issue at Applause Testing Services - https://platform.applause.com/products/27563/testcycles/380123/issues/5714992
---- ACTION DETAILS ----
Action Performed:
1. Go to http://dev-map.monkey…
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I just applied `snakefmt` to nextstrain/monkeypox. While I love the idea of a snakemake formatter and you've done a great job, the result for our main Snakefile is a bit too whitespacy.
In particul…
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This work should include write-ups on results and initial conclusions on the standards a given data must meet to be considered 'regulatory-grade'. This work will also help build use cases for DB view …
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The number of recovered cases is only 5 in total now. This is lower than expected because there were around 30,000 confirmed/suspected cases on 01Aug2022.
 Google Sheets. Instead, it should run as a set of containerized services. To do this, we need a k8s cluster and supporting AWS services (terra…
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Talking to Vitor Borges, we realised that there is a need for a tool like codon2nucleotide for monkeypox - especially for translating between different reference coordinate systems.
I may try to fi…
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### Context
In internal discussions on how to implement #860 and through my prototype in [monkeypox/ingest](https://github.com/nextstrain/monkeypox/blob/78d5b0e65f80c1817e6175f77c4154d9972e57f9/inges…
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> Can we use the WHO ISO3 codes? Might make mapping simpler especially if the map also uses ISO3
Sure, I think we might want to make a separate script or output for that, so that we provide…
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I've encountered the following bug twice in monkeypox CI running in Github Actions:
```
ERROR: Was unable to refine time trees:
augur refine is using TreeTime version 0.9.2
A value in x_new is a…