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I am trying to create evidence and msms.txt files for maxquant search
from a fasta file but…
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For proteins there is a single type allowed:
https://github.com/geneontology/go-annotation/blob/master/specs/gpad-gpi-2-0.md#gpi-entity-types
Do we also need to distinguish
1. Reference from i…
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- will map measurement terms from [oba-efo-unreviewed.dosdp.tsv](https://github.com/obophenotype/bio-attribute-ontology/blob/master/src/mappings/oba-efo-unreviewed.dosdp.tsv)
- filtered by **attribut…
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Please provide as much information as you can:
* **Suggested term label:**
signal peptidase activity
* **Definition (free text)**
Catalysis of the hydrolysis of a signal peptide of a poly…
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This is part of the ASCT+B harmonisation initiative. New terms are being spawned from [the kidney table](https://docs.google.com/spreadsheets/d/1BihrOU9vWrsA_wYjcbdPUr42_Sb22CO3gkBDieiYQPs/edit#gid=10…
ghost updated
11 months ago
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PA2G4 | Proliferation-associated protein 2G4 | | neutrophil degranulation | | Reactome | Homo sapiens | TAS | | protease family m24 methionyl aminopeptidase, aminopeptidase p pthr10804 | pro…
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Lineage of:XBB.1.9.1 with ORF1A:A79T -> C22858T -> C7303T + [G23012A + C23013A (reversion)](S:E484K)
Earliest sequence:2023-05-22 (Spain)
Most recent sequence:2023-08-21 (USA)
GISAID Search： G500A,…
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- [x] GO:0039576 suppression by virus of host JAK1 activity -> also a child of ' GO:0039514 suppression by virus of host JAK-STAT cascade'; cannot annotate the annotated proteins to 'JAK1 inhibitor ac…
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Hello, I am trying to run your code for "predicting new data" part. I follow all your command from creating new environment, install the requirement based on your txt file, until running the bash scri…
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When this is reported for MODs could it be restricted to the MOD annotations?
tks,
WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level term…