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Hi Ferchaure,
I have been using wave_clus to sort .pl2 files. Using raw WB signals collected on an OmniPlex, we filtered and digital filtered in matlab to create .mat files that are then fed into W…
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This issue is best illustrated with a picture (see attached)
Kilosort originally gave me two units (yellow and green in the attached plot) but I noticed that there was unphysiologically high 0ms co…
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**What is the bug?**
Currently, the Trace Analytics Dashboard, when viewed on a Jaeger datatype, presents the following graph and table :
![image](https://user-images.githubusercontent.com/11318/213…
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estimate SNR and suggest channels to focus and/or avoid.
This could speed up process for doing stimulation (e.g. single unit triggered stim), specially if high density MEA are available. It could als…
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- [ ] ~ syntax for fhome on linux not working / probably won't be supported
- [ ] -make note that preprocessing on mutli-run calls is all per-segment
- [ ] currently only spikeglx supported
- [ ] p…
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Hi,
I have a simple question regarding the installation of spike sorters that I can't seem to find an answer for in th docs. I have pykilosort previously installed in a different environment, and now…
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Hi Jeremy — this is a great project, and I really appreciate the close integration with spikeinterface, which I've been trying out for a little bit now. I do most of my spike sorting on a computing cl…
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from https://spikeinterface.readthedocs.io/en/stable/modules/comparison.html#multiple :
_If available, amplitudes are extracted from the “spike_amplitude” extension (recommended). If the “spike_ampl…
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We store synapse IDs in our connectivity matrices, which we read during synaptic effect application. If the synaptic effect modifies pre- or postsynaptic neuron variables, the synapse IDs are used to …