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Hi Dorado team,
From the documentation I couldn't find any information on how to use splice aware mode for mapping during basecalling with minimap2. Any help would be much appreciated.
Thanks,
…
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Hey there,
I'm trying to load my SJ.out.tab files produced using DRAGEN RNA Pipeline. The file produced by this pipeline is pre-filtered, using these rules declared on Illumina support:
1. SJ is a…
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Running v. 2.0.3
```
reademption align -p 40 --poly_a_clipping -f analysis_reademption -q -g -S
reademption coverage -f analysis_reademption -p 40
```
In the coverage files, a constant value…
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Hi, there,
I am running braker3 with --prot_seq option. Any idea of what is going?
[Tue Nov 14 00:31:01 2023] 96827/96827 (100%) pairs aligned
[Tue Nov 14 00:31:01 2023] Alignment of pairs fin…
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This issue will track the progress of making the shell for the magnetic breakaway adapter that can be 3D-printed for encasing the electronics that makeup the adapter.
This may change as the prototy…
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**Describe the bug**
I ran mgatk-del-find on a set of BAM files. I removed any reads that were not on the mitochondrial genome.
mgatk-del-find progresses to the visualisation part and then fails wi…
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Hi, the instructions for IsoQuant asks to use a reference genome FASTA specifically. Would it not work for a reference transcriptome? Thanks!
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I've never done transcritpomics where there's been a reference genome! And i realized i haven't done it yet... and should for WSN... so anyway:
there's a published genome for _Pycnopodia helianthoi…
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Hi
I get the follwing error when trying to build a reference, any help is greatly appreciated! Thanks
FTP
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Hi team KB,
We are trying to use **kb count** with a new **10x Visium** dataset (https://www.10xgenomics.com/resources/datasets/visium-cytassist-mouse-embryo-11-mm-capture-area-ffpe-2-standard) whi…