-
**1. What were you trying to do?**
I am using the vg tools to construct graphs and genotype SVs on multiple samples. While I don' t know the actual running time and memory for each command.
I us…
-
The Verilog-A model does a manual integration of the filament thickness here:
https://github.com/google/skywater-pdk-libs-sky130_fd_pr_reram/blob/6574676cbbd062d63be0f090013d59ced7302349/cells/rera…
-
The GFA specs state that overlaps for `L` lines are optional, but minigraph seems to require these. I think this happens because there is no way to avoid parsing a CIGAR string in [this code block](ht…
-
[Phred quality scores](https://en.wikipedia.org/wiki/Phred_quality_score) are log scores. A quality of 30 stands for a 1 in 1000 error rate. A quality of 10 stands for a 1 in 10 error rate. The averag…
-
### Description of feature
As originally raised by @d4straub on [Slack](https://nfcore.slack.com/archives/CE6SDBX2A/p1684495819945059), a big issue in metagenomics/microbiome research is insufficie…
-
🔴 Title : Real Estate Market Analysis Dashboard
🔴 Tech stack : pydashboard,python
🔴 Objective :
The primary objective of the Real Estate Market Analysis Dashboard is to provide users with an intera…
-
@hmottestad in https://github.com/filip26/titanium-json-ld/pull/272 (cc @filip26)
> - I've been using https://github.com/umbreak/jsonld-benchmarks a bit and managed to make it a somewhat faster. I d…
-
# Update May 28th
Today, I was able to complete the pipeline up till deseq2 or possibly featurecounts. The Star script is finished, and now, within the Star rule, I am using samtools to separate th…
-
Hi Amy,
After reviewing your paper, I believe you did a great job in several areas. Here are some suggestions that I hope will help in refining your final version:
Strong Positive Points:
The…
-
Ref: https://github.com/dask-contrib/dask-awkward/issues/138
The referenced issue provides a way to make a dask HLG having 746 layers. This size, and much bigger, look like they might be common wit…