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- [ ] Step 1: Find the CSV/TSV source data files and convert those into JSON records for MongoDB, this is step 1 for the biomuta migration/rewrite.
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I ran the following command
```
Rscript "process-gds-file-with-dracarys.R" \
--out-dir /path/to/tempdir \
--file-prefix "multiqc_data" \
--file-type "MultiqcFile" \
--presigned-url …
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Currently, 32% of our associations in 0.8 have no genomic coordinates assigned to at least one feature.
These fall into the following categories:
- [ ] Associations harvested from CGI all lack e…
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Airway Microbiome and Serum Metabolomics Analysis Identify Differential Candidate Biomarkers in Allergic Rhinitis - Yuan et al. - Frontiers
https://www.frontiersin.org/journals/immunology/articles…
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**Describe the bug**
I created a BCO called "OncoMX Biomarkers" previously and published version 0.1. I now am trying to edit the saved draft so I can publish a version 0.2. However, when I click on …
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From GlyGen "How to Cite" Page:
- [x] Remove GlyGen Logo download
- [x] Replace "Our Publications & Citations" with "Relevant Publications"
- [x] Remove all GlyGen related papers
- [x] Remove "O…
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Hello, I have run the TRUST4 based on our bulk RNAseq cohort (PE150bp, ribo-zero), where fastq is input, but the results are not consistent with other immune metrics (GEP based). I want to optimize th…
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Dear SuStaIn friends,
I had encountered an error on a number of occasions when using SuStaIn on different datasets. The error itself looked something like this:
```
Traceback (most recent call …
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I am using mzkit-20240209 version, it seems that mzML can batch import, but can not batch run peak extraction? It can only be done by right-clicking deconvolution one file at a time, but this step app…
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I'm concerned that the cutpoint returned by `surv_cutpoint()` does not provide an adjusted p-value from the maxstat package. This leads users to use this cutpoint with the `surv_pvalue()` function whi…