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The pedigree is shown as A000001 / A000002, but shouldn't it be Name001/Name002?
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Hi,
I would like to run MP on a test dataset to ensure it is working properly and that the databases it is using are correctly formatted. There is a directory called "input" in the MP directory, that…
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- 90 % Complete Overall.
Prepare for the **Hackathon**.
Making progress towards these aims:
* Consolidated **data model** of our heterogeneous sources: [55%]
* Clinical
* Environmental
…
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Error
```
ebwtTotLen: 4052416
ebwtTotSz: 4052416
color: 0
reverse: 1
Total time for backward call to driver() for mirror index: 00:00:14
Creating gffutils database for /BiO/BioTools/b…
hmkim updated
7 years ago
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Hi there,
I was hoping to run the MG94 model and/or M3 (in PAML) but to account for variations in synonymous substitution rates and was wondering how I would do that in Hyphy. I read in [Pond and Mus…
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We talked about looking for important genes in the transcriptome.
There are several sources for these. Maybe we she compile these in a central location?
Possibly in this thread or create a wiki pa…
sr320 updated
8 years ago
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The sweetpotato breeding program at NCSU takes photos using the fieldbook app, along with traits currently in the ontology. Should a photo trait be considered part of the ontology?
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The easiest workflow should allow the following statement to generate AliTV JSON files:
`# download a number of fasta and/or genebank files`
`./alitv.pl *`
This should create a set of AliTV JSON inp…
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Dear colleagues,
Each time when I supply HyPhy (specifically BUSTED, aBSREL) with a tree topology, should I give it the tree that is the best tree for this particular alignment, or the tree based on …
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I am trying to run nonCodingSelection.bf after trimming the gap with removeGap.py in linux system. But it kept reporting the following error:
function PopulateModelMatrix (dummy)
…