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**Describe the bug**
During pip install giotto-tda, dependency on pycairo error thrown.
**To reproduce**
Install Python 3.8.3 on Windows 10, and run pip install giotto-tda.
**Expected behavi…
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**Submitting author:** @kulbachcedric (Cedric Kulbach)
**Repository:** https://github.com/online-ml/deep-river
**Branch with paper.md** (empty if default branch): paper
**Version:** v0.2.6
**Editor:**…
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I've noticed some inconsistency between CARDS deconvolution vs. DWLS giotto. Is there a reason why since it seems like the discrepancy should be minimal
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**Describe the Error**
Looking through the `GiottoData` package, I can locate images that look like the ones for the mini cosmx dataset in `loadGiottoMini`. But when I try to `reconnectGiottoImage`…
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Submitting Author Name: Sebastian Krantz
Submitting Author Github Handle: @SebKrantz
Other Package Authors Github handles: @rbagd
Repository: https://github.com/SebKrantz/dfms
Version submitt…
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Is there a way to combine multiple samples in giotto? I was looking at the manual and could not find anything regarding that I was wondering if it is possible to do this in giotto? if not is there a w…
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In a new environment:
```
(teaspoon) C:\Users\x\teaspoon>pip install .
WARNING: Skipping C:\Users\x\anaconda3\Lib\site-packages\semver-2.13.0.dist-info due to invalid metadata entry 'name'
WARNING…
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Hi there,
I'm having some trouble running doLeidenCluster() function on my giotto_object. I've been following the Nanostring_cosmx_lung_cancer (4.0.3) workflow step-by-step, but I can't seem to fi…
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**BUG REPORT**
***Describe the bug***
We have noticed a strange behavior in our Bookkeeper cluster in production. In summary, we are currently unable to access the data of some ledgers that shou…
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Hi Giotto devs,
Thanks for a great tool! I am currently struggling with an issue when running spatPlot2D, code:
spatPlot2D(gobject = visium_liver, cell_color = 'in_tissue', point_size = 2,
…