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This group will focus on mass-spectrometry assays, and more specifically proteomics and metabolomics. Given that there will be presentations and posters focusing on infrastructure for raw data manipul…
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- [ ] Look at the [list](https://docs.google.com/spreadsheets/d/1wNtmceBQwZu71gmQ1Z48yqNdV0zNu9WfZJ5IAhoRnMw/edit#gid=845169585) of data types cohorts are collecting and determine existing nextflow/CW…
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Posted by @schymane in https://github.com/egonw/ELIXIR-Tox/issues/10#issuecomment-388739436:
A few examples
(a) in R packages documented with roxygen available in github (not on CRAN/BioC)
(b) in…
egonw updated
4 years ago
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I would guess there is a consensus on the importance of pursuing these across our series (but crucially, comparatively with other external leads, at least some of which should have validated targets).…
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Like:
```java
Unit unit = UnitFactory.getInstance().getUnit("http://qudt.org/vocab/unit#Centimeter")
```
egonw updated
3 years ago
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Hi,
Thank you for this very comprehensive suite of software for metabolomics. I have a dataset which I was attempting to use this software for and was trying to preprocess my negative polarity rawd…
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I was pleased to read the announcement for Datamed v2.0 so I searched for ImmPort content.
Search for repository immport
Click on green hyperlink text ImmPort
to go to
https://datamed.org/www.…
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In this session, we would like to identify and discuss challenges and opportunities in mass spectrometry (MS)-based omics (proteomics and metabolomics) within the Bioconductor project. These topics co…
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**Describe the bug**
On a dataset page the manuscript links display nicely as citations, but they are not hyperlinked to the relevant DOI. The only hyper link that is added is to the PMID, but the PM…
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Hi dear developers,
We have generated an in-silico HRMS/MS database focused on our model organism. These compounds are structurally described in the literature but are absent in the spectra databa…