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from: http://cos.name/wp-content/uploads/2009/12/An-Introduction-to-Matrix-Visualization-and-corrplot-Package.pdf
Disadvantages:
- Lack seriation method
- Slow and sucks when handle large matrix
…
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When generating the termite plot and setting figure.autolayout to true, the plot always appears as such .. is there a way to actually just generate the plot at default ratio dimensions?
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Before the credit, it should mention which parameters were used for creating the heatmap (transformation, distance and clustering methods for each dendrogram, number of clusters, color range, etc)
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Code example:
The original ggplot2 output:
```r
library(ggplot2)
p
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Hi,
I'm trying to plot a heatmap with user defined colors:
```
library(heatmaply)
library(RColorBrewer)
set.seed(1)
mat
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There was a post today on R-bloggers about shinyHeatmaply. Here is the link
https://www.r-bloggers.com/shinyheatmaply-a-shiny-app-for-creating-interactive-cluster-heatmaps/
When I tried to execute…
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Example:
```r
library(heatmaply)
heatmaply(mtcars, row_dend_left = T,
plot_method="plotly")
```
![image](https://cloud.githubusercontent.com/assets/976006/24837632/23b8384a-1d41-1…
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Example:
```r
> heatmaply(mtcars,
+ plot_method="plotly")
Warning message:
'heatmap' objects don't have these attributes: 'marker'
Valid attributes include:
'type', 'visible', 'sho…
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(I think I filed this on the dextend package first on accident, so posting correctly here)
I am trying to plot a simple two columned dataframe and receive the following error:
`Error: all(vapply…
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Is it possible to adjust the width/height of the dendrogram on the left and the top?
Is subplot_widths for that purpose? I cannot get that working though...