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Hi,
Thanks for the great tools.
I have used blobtools bam2cov to get the coverage values from a different set of reads than used to make an assembly.
The output, as you know, looks something like t…
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Hi,
Using that command:
blobtools create -i sm.scafSeq -t assembly_se_uniref.daa.tagc -t assembly_se_nt.blastn -y soap --nodes nodes.dmp --names names.dmp
I got an error:
[STATUS] : Parsin…
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Hi,
Thanks for the great set of tools.
I just started using blobtools, but I have seen this message twice when doing `blobtools blobplot`:
```
/users/jurban/software/localpy/lib/python2.7/site-pack…
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Hello, thanks for making this great software! I am using it for the first time, and I tried plotting my BlobDB.json file using this command:
blobtools plot -i /Users/cg449/Desktop/Tripsacum/transcrip…
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```
(blob_env)lapalmejo@QCSTJE669854L:~/prog/blobtools$
./blobtools comparecov -i test_blob.BlobDB.json -c ~/data_blobtools/TG-300.vs.nHd.2.3.abv500.bam.cov --log -r superkingdom
[STATUS] : Readi…
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Hi Dom,
I put my data into blobtools and generated a plot. However, using the blobtools view option the output json file only has no-hit taxonomy matches. I'm not sure why this is happening as a blas…
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Hi,
I am interested in running this tool to possibly visualize and pull out some symbionts from my sample. I was able to use bloobtools to and get the graph and table with view and blobplot commands…
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Hi guys!
Being an old-school user, and maybe just ignorant here, but where/when is the blast done now?
Cheers
Phil