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Same error as with the others: no cancer by system data displayed.
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### Description
Incorrect tumour type in the template.
Observed in the mapping rules:
![Screenshot 2020-10-21 at 11 14 42](https://user-images.githubusercontent.com/38244059/96706556-a5084b00-138e-…
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Hi,
Thanks for update MAESTRO, I have installed the latest MAESTRO but it reports an error:
Seems it is Seurat problem? My Seurat version is 3.99
> Registered S3 method overwritten by 'GGally…
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First, I readRDS for my Seurat/harmony and Signac clustered scRNA and scATAC objects, respectively.
Then, I tried to run the Incorporate function:
coembed
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I am rather new to Github - a 46 year old student just starting an AI Masters at Johns Hopkins, and I'm embarassed to say I can't figure out why I can't get the 'actual' books on my hard drive. I for…
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Hi Mikko,
with a current version of GraphAligner (`master commit 48143daff7b771a7e15ef8e500ccb10011155940 2021-02-19 11:23:24`), I find the following failed assertion in the log during an assembly to…
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### Description
As a user, I want to see the protocols for how the data has been generated for the JAX PDX models.
JAX PDX methods: https://drive.google.com/drive/folders/1tm0hyfHaBSezcaLCTZEJYx…
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As a developer/user, I would like the data to be consistent with the data model
SJCRH, LIH, and PPTC has duplicated patient definitions in the patient sheet in the metadata model. This should be clea…
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Hello,
I've downloaded latest version v1.0.2 and tested it with dataset I processed via an earlier version downloaded in July, 2020. I found that in the tsv file, there are two additional columns '…