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The following scripts
- ~/examples/coreg_demos.py,
- ~/examples/nipype_preproc_spm_auditory.py,
- ~/examples/purepython_preproc_demo.py,
- ~/examples/realign_demos.py,
- ~/pypreprocess/datasets.p…
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Hi @ranjit, @sgiavasis, @ssikka, @ccraddock
I'm Angel again. I'm looking for BOLD signal data stored by CPAC. Please, where can I find it?
Also I've another question, the DVARS values into workingD…
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Hi again @jpellman ,
I'm trying to do a SCA Analysis We have problems with the Time Series outputs related with ROI. I don't know in which folder is stored the time series (csv and numpy). Can you he…
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Everytime I try and run the benchmark test it runs into this problem where the GenWarpFields fail to run, when I run the crash file it returns this:
Running: antsIntroduction.sh -d 3 -i /Users/fmri/…
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HI all,
I was running CPAC and it seemed to complete, but I can't find any qc_html files so I can't look at the Quality Control pages. I did notice, however, that I had a large number of crash files.…
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Not sure whether this is an issue or my wrongdoing or even whether this is the best place to ask it but I noticed the following: I ran the preprocessing without problems. The model (design.csv) consis…
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I'm using 0.9.2 and have simply hooked up an fsl.fnirt to an fsl.apply warp. I looked at the commands because I was getting junk back and it's not included in the command it's running. It doesn't cras…
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Hi, I'm new to nipype and I'd like to see it in action before I decide in how far I should use it. I am using the live versions of nipype, nipy, nibabel etc. and I am trying to run the [SPM famous vs.…
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Traceback (most recent call last):
File "spm_multimodal_fmri.py", line 22, in
from pypreprocess.nipype_preproc_spm_utils import (do_subject_preproc,
File "/home/elvis/.local/lib/python2.7/sit…
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whenever the filename is not unique but the directory changes, as in:
```
session_1_func = BOLD/task001_run00*/bold.nii.gz
```
the output is then overwritten by the different images, outputting a co…