-
Dear @yiluheihei ,
Thanks for your efforts. Is it expected to not find any marker when running the run_ancombc() example?
```
data(enterotypes_arumugam)
ps microbiomeMarker-class inherited fr…
-
Yearly variation coupled with social interactions shape the skin microbiome in free-ranging rhesus macaques – Christina E. Roche – Microbiology Spectrum
https://journals.asm.org/doi/10.1128/spectru…
-
Dear developers,
I followed the document to play with the microbiome package:
https://bioconductor.statistik.tu-dortmund.de/packages/3.6/bioc/vignettes/microbiome/inst/doc/vignette.html
Everyt…
-
Bald sea urchin disease shifts the surface microbiome on purple sea urchins in an aquarium – Chloe G Shaw – Pathogens and Disease
https://academic.oup.com/femspd/article/doi/10.1093/femspd/ftad025/7…
-
A comprehensive analysis of gut and skin microbiota in canine atopic dermatitis in Shiba Inu dogs – Mirja Thomsen – Microbiome
https://microbiomejournal.biomedcentral.com/articles/10.1186/s40168-023-…
-
I encountered an issue when running qadabra, it has to do with two of the tools that are used by qadabra; corncob and metagenomeseq. I checked both log files (see underneath), but it was not clear to …
-
New error when running taxonomy
**Command:**
cd $tmp
in_dir=/projects/cmi_proj/blood_microbiome/niaid/combined
out_root=$in_dir/shogun
align_dir=$out_root/wol_alignments
taxonomy=/projects/c…
-
Alterations of the gut microbiome in HIV infection highlight human anelloviruses as potential predictors of immune recovery – Celia Boukadida – Microbiome
https://microbiomejournal.biomedcentral.com/…
-
**Snakemake version**
Version 6.3.0
**Describe the bug**
When executing a Snakemake workflow using google life sciences executor, the first few jobs go through and then I get an SSL error. The …
-
Effects of removing in-feed antibiotics and zinc oxide on the taxonomy and functionality of the microbiota in post weaning pigs – Juan M. Ortiz Sanjuán – Animal Microbiome
https://animalmicrobiome.bi…