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### Description of the bug
Hi, thank you for developing this pipeline. It has exactly all the steps I am interested in. I am receiving the following error related to swap limit/ cgroup and the exec…
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```
This run is similar to how things could look from now on so let's try to make
ECDP recognize as much as possible
```
Original issue reported on code.google.com by `cmnico...@gmail.com` on 24 S…
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We're seeing the following error when running the `bamsormadup` command during atac-seq pipeline when mapping reads with BWA:
```
libmaus2.so.2: undefined symbol: _ZTIN6snappy4SinkE
```
So…
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I have tried running both the run_ORQAS.sh script and running the pipeline step by step. I have tried using my ownrnaseq and riboseq data and the sample data. I keep getting the same error.
termin…
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In semi-model organisms, NCBI and Ensembl usually provide annotations based on ab initio gene prediction and orthology based evidence. With cheap RNAseq, we can build RNA based gene models using Cuffl…
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Hi,
I tried running this pipeline for RNA-seq data that is not strand specific. The pipeline seems to be failing at step 2- the pre processing BAM file step. It seems to generate new BAM files with…
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Why is mixcr part of fusion workflow? 😕
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https://docs.google.com/presentation/d/1XoKQILUMS4j7UO4ZejY_Tjhb0SlkO1sl5RjJG-Q64Sc/edit#slide=id.p4
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### Description of the bug
First of all thank you for developing this tool!
When running
` nextflow pull nf-core/rnasplice `
to install the rnasplice pipeline I get the following messa…
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We found a problem in the gff file you have as test.
* rnaseq
* test-datasets/reference/genes.gff
```
I ensembl transcript 335 649 . + . ID=YAL069W;Parent=YAL069W;geneID=YAL069W;gene_biotype=pro…