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Hi, am using `mmseqs search` and I want to estimate the peak RAM consumption for my uniref90 database. I found a formula for the prefiltering step in your [wiki](https://github.com/soedinglab/mmseqs2…
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Hi,
I've been troubleshooting an issue I've encountered with dnabarcoder's search function when attempting to classify a relatively large number of full ITS sequences (~6000) against the UNITE-INSD …
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Hello,
The mysql message parser doesn't follow the mysql specification and some messages can be mistreated by the packbeat parser.
More precisely, it doesn't handle sequence numbers. The mysql speci…
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Steps to reproduce:
1. Change DB prefix
2. Run archiving
In this case, Piwik will create new records in `prefix_sequence` table and, unfortunately, will start with 0.
There are two suggested soluti…
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Dear @lskatz and @hcdenbakker
I am trying to download the GTDB database and building it using Kraken2.
When I use the following code as mentioned on Github-
`perl scripts/gtdbToTaxonomy.pl --…
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Hello,
I have application using spring boot 3 and embedded database h2 using mode Oracle for integration tests
datasource:
driverClassName: org.h2.Driver
password: password
url: jd…
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Hi, I was wondering if the gtdb reps 220 had been sketched (or is about to be)? Otherwise, would it be possible to provide/point to the command you use to do it? I imagine it's fairly straightforward,…
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I want to generate a db of all kmers and their counts for a reference genome using `meryl count`, then for thousands of small (~1-5 kbp) sequences I want to extract all kmers and find their counts in …
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#### System information
zkEVM Node version: `v0.6.7`
OS & Version: `Linux`
Commit hash : (-)
Network: `Mainnet/Testnet`
#### Expected behaviour
#### Actual behaviour
X Layer(node 0.6.7) u…
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Some models have officially multiple stop sequences. Or sometimes you need multiple stop sequences for different reasons. I think the easiest way would be a + button which adds a new text box for stop…