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It seems to be that pdbfixer is a noarch package (correct if I am wrong). At the moment, a different package is compiled for every python version and platform. Since the last version is rather old, th…
hadim updated
3 years ago
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Hello,
I am using DLSCORE for the first time.
The input files were obtained from a docking made using Schrodinger Suite tools (GLIDE and Induced Fit docking protocol). I am getting warnings like…
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Hi there,
When trying to run the code here `https://protocaller.readthedocs.io/en/latest/Examples.T4-lysosyme.html` I get the following error message (I'm using `gromacs 2020.1`):
````
INFO:ro…
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## Struct: `boardheader`
> kbs_bbs/site/zixia.h
> kbs_bbs/src/struct.h
````c
#define MAXBOARD 2048
struct boardheader {
char filename[STRLEN]; /* the BOARDS files */
char BM[…
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Figuring out how to download data is the first issue faced when trying to implement this paper. The original authors noted in section 3.1 that the dataset was obtained from [Protein Data Bank](https:/…
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Hi,
I get the below error when aligning two repetitive protein sequences. This error occurs with both versions 36.3.8 and 36.3.8h_11-Feb-2020.
```
~/PROGRAMS/fasta-36.3.8g/bin/fasta 7082-1db84…
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Here is a long list to be copied into the Resources section:
# Resources
## Infrastructures
COVID-19 HPC Consortium
https://www.xsede.org/covid19-hpc-consortium
The consortium encompasses compu…
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**Are you using the latest release?**
yes
**Describe the bug**
I have what has to be a very exotic error, caused by a protein that has a long stretch of GT (Gly-Thr) repeats, and little else. Thi…
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Sometimes searching for the primaryAccession we receive from intermine doesn't return any results from RCSB's PDB, and the JVA will crash due to passing null data to pv. (The JVA will suddenly disappe…
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The core DATABASE and DATABASE_CODE categories are intended to provide a single entry per datablock, usually inserted into the datablock when it is ingested by the database and then included when prov…