wrpearson fasta36 issues

wrpearson / fasta36

Git repository for FASTA36 sequence comparison software

Apache License 2.0

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issues

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How I can intall fast36?

#65 Shyer-coma closed 1 week ago
1
Fix building on musl libc

#64 listout closed 1 month ago
2
Build fails with LTO due to type mismatch

#63 eli-schwartz closed 1 month ago
2
Identity differs with different options

#62 yzhang-github-pub closed 1 month ago
1
lalign36 segmentation fault

#61 ehgunther closed 1 month ago
1
ssearch36 library size limit of 45000 sequences?

#60 brush111111111111 closed 1 month ago
3
Effective search space

#59 rmhubley opened 8 months ago
2
make: error: ‘for’ loop initial declarations are only allowed in C99 mode

#58 jonathandmoore closed 1 month ago
1
Different results for single-sequence FASTA query than same sequene in multi-FASTA query

#57 jonathandmoore opened 11 months ago
3
Instruction Windows build

#56 Zombach opened 1 year ago
0
wishes or remarks about LALIGN

#55 peutch closed 1 year ago
3
DLL for fasta36

#54 SaierLaboratory opened 1 year ago
5
Upgrade SIMDe to v0.7.6

#53 mr-c opened 1 year ago
0
remark about the help message regarding the matrices (option -s)

#52 peutch closed 1 year ago
1
remark regarding the output provided when using option -m 9

#51 peutch closed 1 year ago
1
Feature request: add query and subject length to tabular output

#50 yzhang-github-pub closed 1 year ago
2
Cannot allocate buffer 3000002

#49 Zombach closed 1 year ago
1
Number of hits in output

#48 jtremblay closed 1 year ago
4
Win Comp Error

#47 Zombach closed 1 year ago
2
Bug in dealing with dir name?

#46 yzhang-github-pub closed 1 year ago
5
Why is FASTA called FASTA?

#45 Maithy15 closed 1 year ago
1
name function error nmgetlib.c

#44 Zombach closed 10 months ago
2
map_db and .xin files

#43 gundizalv closed 2 years ago
2
can't open library issue

#42 sbaheti84 closed 2 years ago
2
Just reporting arm64 works

#41 gaboentropy closed 2 years ago
0
M1/arm

#40 gaboentropy closed 2 years ago
2
[Documentation] Clarification for the main README, e. g. most-up-to-date fasta (or not) and so forth

#39 rubyFeedback closed 2 years ago
1
Missing sequence in fasta query file results in infinite loop

#38 flange-ipb closed 1 year ago
1
Makefile errors (C99 mode, i redefined, MPI, etc.)

#37 sjfleck closed 3 years ago
3
ssearch36 multithreaded output not consistent

#36 kenietz closed 3 years ago
3
Fix issue #34: Translation table 9 is not applied (parameter -t 9)

#35 flange-ipb closed 3 years ago
1
Translation table 9 is not applied (parameter -t 9)

#34 flange-ipb closed 3 years ago
5
Use different penalty scores for two ends of the DNA sequence

#33 misik opened 3 years ago
1
Undefined behavior with strncpy when source and destination buffer overlap

#32 orbitcowboy opened 3 years ago
2
*** stack smashing detected ***: terminated on the ENA PRO division

#31 olivierfriard opened 3 years ago
9
Parseable output format (-m 10): wrong scores printed for subsequent hit

#30 flange-ipb closed 3 years ago
3
Some special sequence IDs are altered in the result output

#29 flange-ipb closed 3 years ago
3
Update for sequence libraries in relational databases

#28 flange-ipb closed 3 years ago
1
Compile fasta36 binaries as shared libraries instead

#27 jjtapia closed 3 years ago
5
FASTA truncates long paths

#26 shelkmike closed 3 years ago
3
enable building on/for non-x86 systems

#25 mr-c closed 1 year ago
6
enable build hardening

#24 mr-c closed 4 years ago
1
glsearch36 and similarity

#23 RamilNurtdinov closed 4 years ago
7
v36.3.8g build fails on undeclared variable

#22 mathog closed 4 years ago
6
Result is "unpredictable" if library_file contains more sequences

#21 ondra-m closed 4 years ago
2
use of `mktemp' is dangerous, better use `mkstemp' or `mkdtemp'

#20 tseemann closed 4 years ago
3
Warning - unrecognized residue

#19 TimothyStephens closed 4 years ago
2
supporting Unicode encoded files

#18 peutch closed 4 years ago
1
ggsearch

#17 gaboentropy closed 5 years ago
3
Sliding window searches

#16 susheelbhanu closed 4 years ago
1